Protein ZmGATA39
ZmGATA39 is a protein in the C2C2-GATA family.
Information
TF Name: ZmGATA39
Species: Maize
TF Family: C2C2-GATA
Gene Name(Synonym): ZmZIM36
Uniprot ID: C4IZY4
Subgenome: 1

Protein ZmGATA39

ZmGATA39 is a protein in the C2C2-GATA family.

Overview of domains present in v5 transcripts
PF00320PF06200PF06203PF09425
Zm00001eb226740_T002
Zm00001eb226740_T001
Zm00001eb226740_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d014656DAPseq no logo sequence fimo position
Zm00001d014656DAPseq no logo sequence fimo position
Zm00001d014656ChIPseq no logo sequence fimo position
Zm00001d014656PChIPseq no logo sequence fimo position

Interactions where ZmGATA39 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGATA39 is the target  
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There are 65 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb226740_T002 from maize genome v5

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF06200
PF09425
PF06203
PF09425
PF00320
Hover here to show all domains

Nucleotide Sequence
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TGGACGCCTACTACGTCGTCTTCGT...

GRMZM2G058479_T01 from maize genome v3


Related TFome: pUT6097

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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ACTACGTCGTCTTCGTCTCTCCAAC...

GRMZM2G058479_T02 from maize genome v3

Amino Acid Sequence
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MDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELSSLGGASSSAPYS
KRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDEIAASEMASADGSPNWALVEGRPPS
AAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQSAPHLDGGNGSAMSAPGSELENAAA
AMTNGHESSSSGV

Nucleotide Sequence
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ACTACGTCGTCTTCGTCTCTCCAAC...

Zm00001d014656_T001 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSF
QGEVYVFDSVSPDKVQAVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRM
QRNRGQFTSSKPKPDEIAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGL
LRDVTKSPVPLQATQSAPHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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CTCCAAATCGAAACCAGATTGAAAT...

Zm00001d014656_T002 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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CTAGGAACACCGTACAAAAAAAAAC...

Zm00001d014656_T003 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGQNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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CTAGGAACACCGTACAAAAAAAAAC...

Zm00001d014656_T004 from maize genome v4

Amino Acid Sequence
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MEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQAV
LLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDEIA
ASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQSAP
HLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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TACCAGCCGCGCCGGGGGCCCGAGC...

Zm00001d014656_T005 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFD
SVSPDKVQAVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFT
SSKPKPDEIAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSP
VPLQATQSAPHLDGGQNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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TCCATGTCCCACCACGACGGAAGCA...

Zm00001d014656_T006 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEVGEEEEEEDEQE
DEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQ
AVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDE
IAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQS
APHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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CCCGCCGCTCATCCATGTCCCACCA...

Zm00001d014656_T007 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQG
EVYVFDSVSPDKVQAVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQR
NRGQFTSSKPKPDEIAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLR
DVTKSPVPLQATQSAPHLDGGNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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AAACCAGATTGAAATCCTAGGGGCT...

Zm00001d014656_T008 from maize genome v4

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQQLQGHEQEVGEEEEEEDEQEDEMEEEDEDEHEGQHGGIGGEHVPMDADAAAAAAAAAVS
QMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELSSLGGASSSAPYSKRLNYPHRVASLMRF
REKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDEIAASEMASADGSPNWALVEGRPPSAAECHHCGTNATATP
MMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQSAPHLDGGVSFSFFVRCVCFLPNLGGDPVWLSLIR

Nucleotide Sequence
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ACGTCGTCTTCGTCTCTCCAACCCG...

Zm00001eb226740_T001 from maize genome v5

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEDEDEHEGQHGGI
GGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELSSLGGAS
SSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDEIAASEMASADGSPNWALV
EGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKNGSAMSAPGSELENAAAAMTNGHESSSSGV

Nucleotide Sequence
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TGGACGCCTACTACGTCGTCTTCGT...

Zm00001eb226740_T003 from maize genome v5

Amino Acid Sequence
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MSHHDGSKPYQPRRGPERHPQPADGIAAPPPAAVAPSVEHLVAAAAEAEALNRFAAEQQQQLQGHEQEDEDEHEGQHGGI
GGEHVPMDADAAAAAAAAAVSQMDPHSALVAGTVPPMATNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELSSLGGAS
SSAPYSKRLNYPHRVASLMRFREKRKERNFDKKIRYSVRKEVALRMQRNRGQFTSSKPKPDEIAASEMASADGSPNWALV
EGRPPSAAECHHCGTNATATPMMRRGPDGPRTLCNACGLMWANKGLLRDVTKSPVPLQATQSAPHLDGGNGSAMSAPGSE
LENAAAAMTNGHESSSSGV

Nucleotide Sequence
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ACTACGTCGTCTTCGTCTCTCCAAC...


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